You jumped out of the frying pan into the fire.
You should have removed only the ones that had collapsed.
If you don't get the top anchored on the foundation, they will sag,collapse, etc.
If this is new duragilt you may be O K the first time around, with it being for brood.
After two or three years when you get ready to change it out if you don't get a good coat
of wax back on it may as well discard it.
This is what it looks like when you don't get wax back on it.
doak