No they are not. Squash them all and try again.
The issue may be chill. But could just as easily and more likely been handling. The pupae in the cells are quite fragile between day 9 (capping) and day 14/15 of final maturing. Any disturbance in that time period can damage the umbilical to the jelly which will halt or slow development. Symptoms are dead in cell near completion, undersized runts, deformities, etc.
On the caged cells. Ask him if he put attendants inside the cage with the cell, and if he did then how many. The bees tend and temperature control with their bodies. If they cannot press their abdomens right against the cell, they have no control. The attendant bees also help her to emerge. They shave the wax capping off the end so she has only her cocoon silk to cut. If no bees are in the cage with the cell, it does not maintain steady temperature to mature properly and she may not be able to emerge at all by being trapped by the wax cap.