Hi everyone,
I finally had a chance to go into the hive this afternoon and everything went great. I removed the honey super and set it down on the top board (thanks for the suggestion Cao!), and then set the upper brood box on top of that. I inspected the bottom brood box (which was still in place on the cinder blocks) first. Towards the edges, there were frames that were only partially filled out. In the middle there were filled out frames, and 1 or 2 had honey on them. I removed ~6-7 frames from this box with no brood or honey (just comb). Moving onto the upper brood box, there too were frames around the edge that were not significantly filled. However, towards the middle there were some frames with nice brood pattern (shaped in large circles, covering the middle 40-50% of the frame) and honey. I put all the "good" frames into the bottom brood box and ditched the upper brood box and all the empty / unfilled frames (still can't believe I was able to find ten to remove). I put the honey super on and dumped all the bees still clinging to the frames / box in. Thank you all for the suggestions, I was really happy with how it went and I'm glad I was able to remove all the extra space for winter while keeping all of their honey in the hive.
Some concerns:
I never actually saw the queen, despite looking carefully at every frame I was going to remove before shaking the bees off. I did notice a strange cluster of bees on one of the frames ... I couldn't tell if the queen was under them or if it was just a "beard" trying to stay warm. They looked pretty frantic. Was there a chance this was her? (don't worry, this was one of the frames that I kept)
I ended up having to remove one frame that had a significant amount of capped honey on it (it was bare on the other side of the foundation). Do you think if I uncap the honey and put it in the upper box of the hive (where my top feeder is, and the bees can access through a small hole) they will eat it / move it down? Just don't want them to start building on it.
Edit: Also, below where I set the boxes on the outer cover, there were a whole bunch of hive beetles that had fallen out. I had put beetle blaster traps in about a week ago, but they didn't catch anything (I think its because of bumps and sizing issues on my frames, which prevents me from getting the whole trap to lay flush with the top of the frames). Any suggestions to control them before winter sets in?
Thanks again guys, I really appreciate all of your help!