If the Queen is laying in top and its mostly eggs and uncapped brood, I would check the bottom deep and see if brood is hatching. If so I would do a flip flop, switch bottom for top. Not rearranging any frames. Just switch boxes as they sit.
This puts the Queen back down stairs and by the time she is ready to move up again the capped brood, which "was" on bottom, should be hatched enough to give room.
Other wise, add another deep, or split.
JMO, :)doak